TIME: 12:00-14:00 CET (a total of 24 hours)
LOCATION: BCAM Seminar room and online
There is no registration fee but registration is mandatory.
Registration deadline is on March 15, 2022
For more information, please visit
Or contact us via email
Please find any further information about the program of the school and of the workshop, accomodation and registration on the websitehttps://mmseor2022.wordpress.com/.
Participation and presentation of a talk by young researchers are strongly encouraged. To submit an abstract for a contributed talk, please send an email email@example.com containing the title and a short abstract in .pdf format.
The deadline for abstract submission for a contributed talk is April 15, 2022.
Pasquale Ciarletta, Politecnico di Milano
Anna Marciniak-Czochra, Heidelberg University
Kevin Painter, Heriot Watt University
Benoît Perthame, Université Sorbonne
The Invited Speakers of the Workshop are:
Bruno Buonomo, Università di Napoli
Giancarlo Consolo, Università di Messina
Luís Neves de Almeida, Université Pierre et Marie Curie
Andrea De Gaetano, CNR Research Director, Roma
Laurent Desvillettes, Université Paris- Diderot
Gonzalo Galiano, Universidad de Oviedo
Miroslaw Lachowicz, University of Warsaw
Deborah Lacitignola, Università di Cassino e del Lazio Meridionale
Roberto Natalini, IAC-CNR, Roma
Jonathan Potts, Sheffield University
Luigi Preziosi, Politecnico di Torino
Andrea Pugliese, Università di Trento
Vicentiu D. Radulescu, University of Craiova
Tommaso Ruggeri, Università di Bologna
Giuseppe Saccomandi, Università di Perugia
Brian Straughan, Durham University
The Scientific Committee:
Piermarco Cannarsa, Università di Roma Tor Vergata
Kevin Painter, Heriot-Watt University, Edinburgh
Benoit Perthame, Sorbonne Université
Luigi Preziosi, Politenico di Torino
Marco Maria Luigi Sammartino, Università di Palermo
Giovanna Valenti, Università di Messina
The Organizing Committee:
Carmela Currò, Università di Messina
Giuseppina D’Aguì, Università di Messina
Gaetana Gambino, Università di Palermo
Valeria Giunta, Università di Palermo
Maria Carmela Lombardo, Università di Palermo
Università degli Studi di Palermo
Dipartimento di Matematica e Informatica, Università di Palermo
Istituto Nazionale di Alta Matematica-Gruppo Nazionale per la Fisica Matematica (INdAM-GNFM)
PRIN 2017YBKNCE Multiscale phenomena in Continuum Mechanics: singular limits, off-equilibrium and transitions
Summer School on Stochastic Reaction Networks,10-16 July, 2022, Torgnon, Aosta Valley, ItalyInstructors: David F Anderson (University of Wisconsin, Madison, US), L. Popovic (Concordia University, Montreal, CA).
More info athttps://areeweb.polito.it/disma-excellence/events_2022/CRNs/index.html
For more information, please see our announcement at https://compucell3d.org/Workshop22
To register, please visit: www.tinyurl.com/CC3D2022. More information on CompuCell3D is available at https://compucell3d.org/.
AUDIENCE: Mathematical Biologists, Computational Biologists, Experimental Biologists, Medical Scientists and Biophysicists, from undergraduates to senior faculty, with a current or potential interest in mechanistic modeling of biological systems. The course covers multicellular modeling, which applies to developmental and tissue biology, tissue engineering, developmental diseases like cancer, in-host modeling of infection and immune response and tissue-level toxicology. No specific programming or mathematical experience is required.
Summer school attendance guarantees admission to the Model-Building Hackathon.
The Hackathon will group attendees by topic of interest. Experienced modelers will be embedded within each group. Everyone will leave with a functioning core model that they can further customize. Advanced modelers can apply to attend just the Hackathon.
AIM AND FOCUS:
An Introductory Python and Principles of Modeling Tutorial will take place on July 31st, 2022. If you already know Python or have modeling experience, you may skip this Tutorial or take this material as a review
Multicell Virtual-Tissue Modeling Summer School (August 1nd - August 5th, 2022) and Hackathon (August 6th - August 7th, 2022):
Mechanistic modeling is an integral part of contemporary bioscience, used for hypothesis generation and testing, experiment design and interpretation and the design of therapeutic interventions. The CompuCell3D modeling environment allows researchers with modest programming experience to rapidly build and execute complex Virtual Tissue simulations of development, homeostasis, toxicity and disease in tissues, organs and organisms, covering sub-cellular, multi-cell and continuum tissue scales. Virtual-Tissue simulations developed using CompuCell3D run on Windows, Mac and Linux and online via the nanoHUB CompuCell3D deployment (https://nanohub.org/tools/cc3dbase4x). CompuCell3D is open source, allowing users to extend, improve, validate, modify and share the core software. By the end of the Summer School and Hackathon, participants will have implemented a basic simulation of their particular biological problem of interest. Post-course support and collaboration will be available to continue simulation development.
The summer school will include five days of lectures and hands-on computer tutorials. In the modeling Hackathon teams of advanced and beginner modelers will develop research-quality models of their systems of interest. Each attendee will also present a mini talk on their problem of interest. We will provide after-hackathon support to assist users in the development of these models in their research.
● Principles of modeling biological and biomedical problems
● Python and Antimony scripting
● Multicellular Virtual-Tissue simulations with CompuCell3D
● Combining network models with virtual-tissue models in multiscale models
Prof. James A. Glazier (Indiana University), Dr. T.J. Sego (Indiana University, CompuCell3D lead developer), Dr. James Sluka (Indiana University), Prof. Julio Belmonte (North Carolina State University), Dr. Josua Aponte Serrano (NIAID), Prof. Gilberto Thomas (Federal University of Rio Grande do Sul, Brazil), Pedro Cenci Dal Castel (Federal University of Rio Grande do Sul, Brazil), Dr. Lorenzo Veschini (King’s College London); Prof. Yi Jiang (Georgia State University); Dr. Priyom Adhyapok (Duke), Dr. Maciek Swat (CompuCell3D lead developer).
Because the number of places is limited, admission is by application only. To apply for admission, please visit the school website at https://compucell3d.org/Workshop22
and to register, please visit: www.tinyurl.com/CC3D2022.
DEADLINE for APPLICATIONS:
June 1st, 2022. Applications will be processed as received.
The workshop is partially supported by grants from the US National Institutes of Health. Enrollment is free.
We look forward to welcoming you online this August!
James A. Glazier
Department of Intelligent Systems Engineering
Indiana University, Bloomington
After the postponements forced upon by the pandemic, we are glad to announce that the 7th edition of The Helsinki Summer School on Mathematical Ecology and Evolution, an EMS-ESMTB School in Applied Mathematics, will be held between 21 and 28 August 2022 in Turku, Finland.
The core program consists of five series of lectures:
Josef Hofbauer (University of Vienna): Dynamical systems in mathematical ecology Gergely Röst (University of Szeged): The mathematics of infectious diseases
Pieter Trapman (Stockholm University): Stochastic models of epidemics
Jarno Vanhatalo (University of Helsinki): Linking ecological models to data through Bayesian statistics
Christian Hilbe (Max Planck Institute for Evolutionary Biology): Dynamics of social behaviour
All young researchers working in mathematical ecology can apply from all countries, especially from Europe and the Mediterranean. The school is aimed at graduate students of mathematics, but we also welcome students of biology with sufficient background in mathematics, advanced undergraduates, and postdocs.
For more information and details of the application procedure, please visit the school's webpage
With best regards,
Ilaria DORIGATTI, Faculty of Medicine, School of Public Health
Imperial College London, United Kingdom
Ganna ROZHNOVA, Department of Epidemiology – University Medical Center
Utrecht, The Netherlands
Antonio CAPELLA, Marcos A. CAPISTRAN, J. Andres CHRISTEN, National
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